Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGGCAGTGTGCAGGA
....((((((((((((((...&))))))))....)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001349902
GeneSymbolHPS4
Binding site4555,4574
Score0.833
Seed0
Au0.426
Energy-26.7
Binding len19
Me-9.547
Phylopstem0.22782235555555566
Phylopflank0.4260213224999998
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure