Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
.((((((((((((((((((((&))))..)))))))......................))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349902
GeneSymbolHPS4
Binding site2312,2358
Score0.923
Seed1
Au0.397
Energy-22.8
Binding len46
Me-3.793
Phylopstem-0.012033128888889029
Phylopflank1.4345471925000004
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure