Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGGGCTTCCCGCAGTGCC
..(((.((((((((.((((((&)))))).))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178423
GeneSymbolHDAC9
Binding site1137,1160
Score0.923
Seed0
Au0.485
Energy-20.0
Binding len23
Me-7.593
Phylopstem0.33508989333333333
Phylopflank0.19713595949999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure