Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTATTGCTCGCAGTTGTT
..(((((((((((.(((((((&))))))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178423
GeneSymbolHDAC9
Binding site5969,5990
Score0.923
Seed1
Au0.632
Energy-19.3
Binding len21
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure