Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGACTGCAAGAAACTGGGCTGCT
..((((((((((((((.....&))))))))).........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178423
GeneSymbolHDAC9
Binding site2144,2168
Score0.923
Seed1
Au0.559
Energy-19.1
Binding len24
Me-4.957
Phylopstem4.610317095652175
Phylopflank3.8032226375000002
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end3
PositionCDS
2D Structure