Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCCTGGATCAGTCAGTGG
((((((((((...((((((...&))))))...)))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178424
GeneSymbolSOX30
Binding site788,811
Score0.846
Seed1
Au0.338
Energy-23.8
Binding len23
Me-11.398
Phylopstem6.240304615384615
Phylopflank5.2423899249999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure