Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTGCGGCGGCTGCTGCAGG
(((((((.((.((((((..((&))..)))))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178424
GeneSymbolSOX30
Binding site555,577
Score0.923
Seed1
Au0.324
Energy-23.0
Binding len22
Me-9.076
Phylopstem6.48834
Phylopflank4.98140654125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure