Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCTCAGGAAGACAGCAGAACTGCTGGTGAGCCTATGG
((..((((((((((((((((((&))))))))))))).................)))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178425
GeneSymbolHDAC9
Binding site3466,3506
Score0.846
Seed0
Au0.456
Energy-22.6
Binding len40
Me-8.527
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure