Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGGGCAGTATGGAGGCAGC
..(((.((((..((((((((((&))))))))))......)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178425
GeneSymbolHDAC9
Binding site1413,1438
Score0.846
Seed0
Au0.397
Energy-22.7
Binding len25
Me-13.03
Phylopstem2.24446011
Phylopflank1.8769865937500003
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure