Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGGGCTTCCCGCAGTGCC
..(((.((((((((.((((((&)))))).))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178425
GeneSymbolHDAC9
Binding site1315,1338
Score1.0
Seed0
Au0.485
Energy-20.0
Binding len23
Me-7.593
Phylopstem2.1850282583333334
Phylopflank1.51603428625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure