Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTCAACAACCGCCAGCACAGCAAC
((((.(((((((((((.....&.)))))))).)))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178427
GeneSymbolARNT
Binding site2217,2244
Score0.846
Seed0
Au0.441
Energy-20.8
Binding len21
Me-8.057
Phylopstem3.336928583333334
Phylopflank4.809819474999999
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end3
PositionCDS
2D Structure