Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCAGAAAGGAGTCTCTGA
((..(((((((((((((.(...&).)))))))))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349905
GeneSymbolHPS4
Binding site3767,3787
Score1.0
Seed0
Au0.618
Energy-25.3
Binding len20
Me-8.527
Phylopstem2.779007615384616
Phylopflank2.1764721675
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure