Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTCCTGGAGAGGAGCTTGAAGAGGTGG
((((((((((((((((((.(((&)))))))))))))))))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349905
GeneSymbolHPS4
Binding site228,256
Score1.0
Seed1
Au0.485
Energy-25.1
Binding len28
Me-3.938
Phylopstem0.05052941666666668
Phylopflank-0.16621563374999998
Longest consecutive pairings17
Position of longest consecutive pairings11
Pairings in 3prime end7
Position5UTR
2D Structure