Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACGACTGCAGCGGGATGGACCAGTACTGCAT
.(((((((((((((((..(((&))).)))))))))))...............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178432
GeneSymbolCDK20
Binding site69,104
Score0.846
Seed1
Au0.294
Energy-21.8
Binding len35
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings20
Pairings in 3prime end6
Position5UTR
2D Structure