Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCGACCAGCTGTAT
.(((((((..((((((.((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349905
GeneSymbolHPS4
Binding site2585,2603
Score1.0
Seed1
Au0.529
Energy-21.1
Binding len18
Me-6.092
Phylopstem2.3492864285714288
Phylopflank1.01505953625
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure