Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACGACCGGCGGCGCGGCTGCGT
.(((((((((((((((.(((.&)))..))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178448
GeneSymbolSAPCD2
Binding site210,237
Score0.846
Seed1
Au0.279
Energy-24.7
Binding len27
Me-3.793
Phylopstem2.9332907142857145
Phylopflank2.0908648175
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure