Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGTGAATGGGCAGCCGCAGTATGTCATGCAAG
((((((((((((((((.....&.)))))))))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178450
GeneSymbolMARCHF3
Binding site359,395
Score0.923
Seed1
Au0.426
Energy-23.4
Binding len24
Me-3.938
Phylopstem0.16679325454545457
Phylopflank0.4638594137500002
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end3
PositionCDS
2D Structure