Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCCATGATCAAGCAGCGGGCAGA
((((.((((((((..((((((&)))))))))........)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178452
GeneSymbolDNAAF1
Binding site1099,1128
Score0.846
Seed0
Au0.471
Energy-18.8
Binding len29
Me-9.649
Phylopstem2.374749375
Phylopflank1.4049608043124997
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure