Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGGCCATGCCAGG
..((((((((((((((((((((&)))))))))))...........................))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178456
GeneSymbolC20orf85
Binding site490,542
Score0.846
Seed1
Au0.368
Energy-24.5
Binding len52
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings41
Pairings in 3prime end8
Position3UTR
2D Structure