Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGAGCTCGACGATGCGATCAGAAGCTGCAAA
((((((((..(((((((..((&.))..)))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178456
GeneSymbolC20orf85
Binding site394,429
Score0.846
Seed1
Au0.441
Energy-20.8
Binding len24
Me-6.236
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure