Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTGCTGTATCTGCTGCT
..(((((((((((.((((((.&)))))).))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178460
GeneSymbolSIRPD
Binding site92,114
Score0.846
Seed1
Au0.456
Energy-23.2
Binding len22
Me-5.814
Phylopstem-0.49764173571428566
Phylopflank0.13847482250000004
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end6
PositionCDS
2D Structure