Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACCAGCAGCAGCAAG
((((.(((((((.(((.....&))))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178466
GeneSymbolBPIFA3
Binding site439,456
Score0.846
Seed0
Au0.471
Energy-17.5
Binding len17
Me-9.346
Phylopstem0.15466963250000004
Phylopflank0.4815888143749999
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end3
PositionCDS
2D Structure