Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTTAGCTGGAAGCTGGA
..((((((((...(((((((((&)))))))))..))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178483
GeneSymbolSCP2D1
Binding site452,473
Score0.846
Seed1
Au0.559
Energy-19.2
Binding len21
Me-12.418
Phylopstem-0.004664111111111153
Phylopflank1.575199616
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure