Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCCAGGCTCCCAGCAGACACTGTCTTTACAATCCCGGAGTCTGTC
..((((((.(((((((((((.&.))))))))..))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178483
GeneSymbolSCP2D1
Binding site326,375
Score0.846
Seed1
Au0.529
Energy-18.9
Binding len23
Me-6.013
Phylopstem1.8469647692307694
Phylopflank1.9312069675
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure