Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGGCTGTACATCCAGAACCTCGGCCGCGAGCTGCGC
.((((((((((((((..((((&.))))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178493
GeneSymbolNOTUM
Binding site1353,1394
Score0.974
Seed1
Au0.338
Energy-26.5
Binding len21
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure