Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCGACTGCCAGATCTTTACACTCACCCCTCCACCTGCCCCGAGGAGTCCGGTC
.(((((((((((...((((((.&.)))))).)))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178497
GeneSymbolODAPH
Binding site135,191
Score1.0
Seed1
Au0.382
Energy-26.5
Binding len21
Me-6.675
Phylopstem0.2803927666666666
Phylopflank1.0487608050000001
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure