Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCGGACTTCCTTATCCCGTCTGTGGGAGACCCAGGTGC
(((((((((((.(((((((((.&)))))))))..................))))).))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178499
GeneSymbolCCDC60
Binding site240,282
Score0.846
Seed1
Au0.456
Energy-23.8
Binding len42
Me-7.284
Phylopstem0.9052267428571429
Phylopflank0.7183752625
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end7
Position5UTR
2D Structure