Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCCCATCCACAGCTGCAT
.((((((((.((.((...(((&)))..)).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178499
GeneSymbolCCDC60
Binding site847,867
Score0.923
Seed1
Au0.426
Energy-19.0
Binding len20
Me-6.558
Phylopstem-0.04917334999999999
Phylopflank0.17331811374999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure