Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGCGGCCGTTCCACACACACAGCTGCGC
.((((((((((((((((.(((&))).))))))))...........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178500
GeneSymbolPHOSPHO1
Binding site861,893
Score0.846
Seed1
Au0.338
Energy-23.5
Binding len32
Me-3.793
Phylopstem0.4223191185185184
Phylopflank1.3066649174999998
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure