Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCATCCCAGCCTCGTCTATGCAGC
(((((((((.((.(((((((.&))))))).))))))........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178500
GeneSymbolPHOSPHO1
Binding site1880,1908
Score0.846
Seed1
Au0.441
Energy-21.0
Binding len28
Me-6.469
Phylopstem1.9206582941176469
Phylopflank1.68332194875
Longest consecutive pairings7
Position of longest consecutive pairings21
Pairings in 3prime end7
Position3UTR
2D Structure