Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGGGCTGCAGCGGCGGG
((((.(((((((((.(.....&).))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178508
GeneSymbolSMIM29
Binding site9,26
Score0.846
Seed0
Au0.273
Energy-19.4
Binding len17
Me-8.792
Phylopstem0.45295258888888884
Phylopflank0.027031096250000004
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end2
Position5UTR
2D Structure