Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTACATGCCAGGC
.((((((((.....((((....&))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178509
GeneSymbolSTXBP4
Binding site5552,5568
Score0.923
Seed1
Au0.529
Energy-17.5
Binding len16
Me-13.353
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure