Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGGACAGCCGTCCAACAAAGAGGTGCAGG
(((((.((((((((((.((((&))))....)))))))).........)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178509
GeneSymbolSTXBP4
Binding site11394,11428
Score0.846
Seed0
Au0.456
Energy-19.9
Binding len34
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure