Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGACCTGCAGGTGTG
..(((.((((((.(.((((((&)))))).).)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178526
GeneSymbolSLC25A42
Binding site2539,2559
Score0.846
Seed0
Au0.412
Energy-22.1
Binding len20
Me-8.883
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure