Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTAATGGAGGAAGCCAGATTGCATGTAGCTGCAAT
(((((((((((((.((..(((&.)))..)).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178527
GeneSymbolSLC9C2
Binding site1913,1951
Score0.923
Seed1
Au0.603
Energy-21.9
Binding len24
Me-4.794
Phylopstem-0.23288832142857138
Phylopflank-0.3839860812125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure