Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGAATGGATAAGCTGCCTAATCCAAAAAGCCCAGTGG
((((((((((.(((((((....&))))))).)))....................))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178532
GeneSymbolRNF180
Binding site311,351
Score0.846
Seed1
Au0.559
Energy-19.7
Binding len40
Me-6.762
Phylopstem2.8607223154838715
Phylopflank3.1897226472499995
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end4
PositionCDS
2D Structure