Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAAAGATTTTCAGTGGCCCCCCATGAGACCCAGACACAAAGAGGAGGAGAATTTCAGTGT
(((((((((((((((((((...&.))))))).........))))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178532
GeneSymbolRNF180
Binding site984,1047
Score0.885
Seed1
Au0.544
Energy-23.8
Binding len34
Me-3.938
Phylopstem1.3790580624999995
Phylopflank1.6591043837500004
Longest consecutive pairings7
Position of longest consecutive pairings26
Pairings in 3prime end5
PositionCDS
2D Structure