Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTTGCAGCTGTAC
.((((((((((((((......&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178532
GeneSymbolRNF180
Binding site435,451
Score1.0
Seed1
Au0.485
Energy-20.3
Binding len16
Me-4.026
Phylopstem2.6316506
Phylopflank2.68246555
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure