Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGAGCCTGGCTGCT
..(((((((.((((.(.(((.&))).).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178532
GeneSymbolRNF180
Binding site35,53
Score0.846
Seed1
Au0.176
Energy-19.4
Binding len18
Me-6.935
Phylopstem0.44026635714285717
Phylopflank0.3424057057142857
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure