Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCCGGAGAGGCAGCCT
....((((((((((((((.((.&)).)))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178537
GeneSymbolB4GALNT4
Binding site3579,3598
Score0.846
Seed0
Au0.25
Energy-26.3
Binding len19
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure