Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCTTCCTGAGCTTGTCCCAGGTGTCCGGGCCGCAGCTGCC
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178537
GeneSymbolB4GALNT4
Binding site2180,2224
Score1.0
Seed1
Au0.294
Energy-24.3
Binding len14
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure