Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGGAAGAGATGGACGAGACGGAGCGAAGGGTGA
((((.(((((((((((((((((&)))))))))))).............))))).)...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178540
GeneSymbolC1QTNF9
Binding site172,211
Score1.0
Seed0
Au0.412
Energy-23.1
Binding len39
Me-8.057
Phylopstem1.78001131
Phylopflank2.2529420962500004
Longest consecutive pairings12
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure