Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGCAGCCGCTGCAGCC
..((.((.(((((((((.(((&)))..))))))))).)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349999
GeneSymbolRBFOX2
Binding site1590,1611
Score0.872
Seed0
Au0.368
Energy-21.5
Binding len21
Me-11.39
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure