Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCCCGCATTTCCAGTCAAACGAGCGTCTGGGGAGGCTGGCCAGCATCGCCAGGCAGCTCCGGTCC
.((((((((((((((((((..&.))))))))))...............))))....)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_178556
GeneSymbolTRIML1
Binding site301,367
Score0.846
Seed1
Au0.294
Energy-25.5
Binding len39
Me-3.793
Phylopstem-0.09526228378378376
Phylopflank0.07781765875000007
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end6
PositionCDS
2D Structure