Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTTGGAAAAGAAACCAAATATAGACAGCCGCAGTC
.....((((((((((((((((&))))).......................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178559
GeneSymbolABCB5
Binding site2191,2231
Score0.846
Seed0
Au0.574
Energy-20.8
Binding len40
Me-13.666
Phylopstem-1.1898773743589748
Phylopflank0.0016050437500000625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure