Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCCAGAAGGGAAGGGAGTGGAGCAGGCAGTGA
(((((.(((((((((((((...&)).)))))))))).............).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178562
GeneSymbolTSPAN33
Binding site1584,1618
Score0.846
Seed0
Au0.353
Energy-23.5
Binding len34
Me-5.839
Phylopstem0.6972181977777778
Phylopflank0.2842810105
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure