Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCTGGCCGGGCTGGTCCTGCGGCCGCGGGTGA
...((.((((((((((.(((.&.))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178562
GeneSymbolTSPAN33
Binding site6,43
Score0.846
Seed0
Au0.191
Energy-23.5
Binding len18
Me-8.415
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure