Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGACCGAACTGCTGCGGG
(((((((..((((((..((((&))))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178562
GeneSymbolTSPAN33
Binding site2762,2784
Score0.846
Seed1
Au0.324
Energy-22.0
Binding len22
Me-7.541
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure