Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCAGAGAGGATGTGTGTGAGGAGCCAGA
..(((((((((((((((.....&)))))............)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178568
GeneSymbolRTN4RL1
Binding site3526,3554
Score1.0
Seed1
Au0.544
Energy-24.2
Binding len28
Me-4.957
Phylopstem0.29579302962962956
Phylopflank0.38240716100000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure