Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTTTGGAGCAGCTGCTGGCGCTCTATGTGGCAGAGATCCGGCGGCTGCAGG
((((((((((((((((.....&.))))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350
GeneSymbolDAXX
Binding site713,766
Score0.846
Seed1
Au0.456
Energy-20.6
Binding len45
Me-3.938
Phylopstem0.9617148976744189
Phylopflank1.121364655
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end3
PositionCDS
2D Structure